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BIMCORE Center for Systems Imaging  · CSI-PET Center  · CSI-BITC DNA Sequencing Electron Microscopy Flow Cytometry Microchemical & Proteomics MRI Center Positron Emission Tomography Center Transgenic Mouse & Gene-Targeting

Publications

Below is a partial list of our user publications. Please contact Hong Yi (hyi@emory.edu) if you have used our core but your publications are not listed here. Feel free to send us a pdf file of your publication so we can link the list to the pdf files.

1998

  1. Lah JJ, Heilman CJ, Nash NR, Rees HD, Yi H, Counts SE, Levey AI.Light and electron microscopic localization of presenilin-1.(1998)J. Neuroscience (17) 6: 1971-1980
  2. Bradley SR, Rees HD, Yi H, Levey AL, Conn PJ.Distribution and developmental regulation of metabotropic glutamate receptor 7a in rat brain.(1998)J. Neurochem.71(2): 636-645
  3. Gutekunst, C-A, Li S-W, Yi H, Ferrante RJ, Li X-J, Hersch SM.The cellular and subcellular localization of Huntingtin Associated Protein 1 (HAP-1): Comparison with Huntingtin in rat and human. (1998)J. Neurosci.18 (19): 41-53
  4. Klement IA, Skinner PJ, Kaytor MD, Yi H, Hersch SM, Clark HB, Zoghbi HY, Orr HT. Ataxin-1 neclear localization and aggregation: Role in polyglutamine-induced disease in SCA1 transgenic mice(1998)Cell 95 (1): 41-53

1999

  1. Gutekunst C-A, Li S-W, Yi H, Mulroy JS, Rye D, Ferrante RJ, Hersch SM, Li X-J.Nuclear and neuropil aggregates in Huntington's disease: relationship to neuropathology.(1999)J. Neurosci. 19(7): 2522-34.

2000

  1. Cassell MD. Yi H, Talman WT.Glycine receptor (gephyrin) immunoreactivity is present on cholinergic neurons in the dorsal vagal complex. (2000)Neuroscience. 95(2):489-97.
  2. Rouse ST, Edmunds SM, Yi H, Gilmor ML, Levey AI.Localization of M2 muscarinic acetylcholine receptor protein in cholinergic and non-cholinergic terminals in rat hippocampus. (2000)Neuroscience Letters284 (3): 182-186
  3. Ozin AJ, Henriques AO, Yi H, Moran CP, Jr.Morphogenetic proteins SpoVID and SafA form a complex during assembly of the Bacillus subtilis spore coat. (2000)Journal of Bacteriology. 182(7):1828-33.
  4. Wheeler VC, White JK, Gutekunst CA, Vrbanac V, Weaver M, Li X-J, Li S-H, Yi H, Vonsattel JP, Gusella JF, Hersch S, Auerbach W, Joyner AL, MacDonald ME.Long glutamine tracts cause nuclear localization of a novel form of huntingtin in medium spiny striatal neurons in HdhQ92 and HdhQ111 knock-in mice. (2000)Human Molecular Genetics. 9(4):503-13.

2001

  1. Yi H, Leunissen JLM, Shi G-M, Gutekunst CA, Hersch SM. A novel procedure for pre-embedding double immunogold-silver labeling at the ultrastructural level.(2001)Journal of Histochemistry & Cytochemistry. 49(3):279-84.

2002

  1. Singaraja RR, Hadano S, Metzler M, Givan S, Wellington CL, Warby S, Yanai A, GutekunstCA, Leavitt BR, Yi H, Fichter K, Gan L, McCutcheon K, Chopra V, Michel J, Hersch SM, Ikeda JE, Hayden MR.HIP14, a novel ankyrin domain-containing protein, links huntingtin to intracellular trafficking and endocytosis. (2002) Human Mol. Genetics. 11(23):2815-28
  2. Tzeng YL, Datta A, Kolli VK, Carlson RW, Stephens DS. Endotoxin of Neisseria meningitidis composed only of intact lipid A: inactivation of the meningococcal 3-deoxy-D-manno-octulosonic acid transferase.J Bacteriol. (2002) 184(9):2379-88.

2003

  1. Torre ER, Coleman S, Yi H, Gutekunst CA, A protocol for isolation and biochemical characterization of stigmoid bodies from rat brain.(2003)Journal of Neuroscience Methods. 125(1-2):27-32
  2. Gutekunst CA, Torre ER, Sheng Z, Yi H, Coleman SH, Riedel IB, Bujo H. Stigmoid bodies contain type I receptor proteins SorLA/LR11 and sortilin: new perspectives on their function.(2003)Journal of Histochemistry & Cytochemistry. 51(6):841-52
  3. Boyd NL, Park H, Yi H, Boo YC, Sorescu GP, Sykes M, Jo H.Chronic shear induces caveolae formation and alters ERK and Akt responses in endothelial cells.(2003)American Journal of Physiology - Heart & Circulatory Physiology. 285(3):H1113-22
  4. Ferguson SM, Savchenko V, Apparsundaram S, Zwick M, Wright J, Heilman CJ, Yi H, Levey AI, Blakely RD, Vesicular localization and activity-dependent trafficking of presynaptic choline transporters.(2003) Journal of Neuroscience. 23(30):9697-709.

2004

  1. Ellenberger D, Li B, Smith J, Yi H, Folks T, Robinson H, Butera S. Optimization of a multi-gene HIV-1 recombinant subtype CRF02 AG DNA vaccine for expression of multiple immunogenic forms. (2004)Virology.5;319(1):118-30.
  2. Smith JM, Amara RR, McClure HM, Patel M, Sharma S, Yi H, Chennareddi L, Herndon JG, Butera ST, Heneine W, Ellenberger DL, Parekh B, Earl PL, Wyatt LS, Moss B, Robinson HL.Multiprotein HIV Type 1 Clade B DNA/MVA Vaccine: Construction, Safety, and Immunogenicity in Macaques.(2004)AIDS Res and Human Retroviruses 20(6): 654-665.
  3. Smith JM, Amara RR, Campbell D, Xu Y, Patel M, Sharma S, Butera ST, Ellenberger DL, Yi H, Chennareddi L, Herndon JG, Wyatt LS, Montefiori D, Moss B, McClure HM, Robinson HL.DNA/MVA Vaccine for HIV Type 1: Effects of Codon-Optimization and the Expression of Aggregates or Virus-Like Particles on the Immunogenicity of the DNA Prime.(2004)AIDS Res and Human Retroviruses 20(12): 1335-1347.
  4. Lyons S, Wang L, Casanova JE, Sitaraman SV, Merlin D, Gewirtz AT. Salmonella typhimurium transcytoses flagellin via an SPI2-mediated vesicular transport pathway. J Cell Sci. (2004) 15;117(Pt 24):5771-80.
  5. Gao X, Nie S. Quantum dot-encoded mesoporous beads with high brightness and uniformity: rapid readout using flow cytometry. Anal Chem. (2004) 15;76(8):2406-10.
  6. Smith AM, Gao X, Nie S. Quantum dot nanocrystals for in vivo molecular and cellular imaging. Photochem Photobiol. 2004 Nov-Dec;80(3):377-85. Review.
  7. Smith AM, Nie S. Chemical analysis and cellular imaging with quantum dots.
    Analyst. 2004 Aug;129(8):672-7. Review.

2005

  1. Gao X, Yang L, Petros JA, Marshall FF, Simons JW, Nie S. In vivo molecular and cellular imaging with quantum dots.(2005) Curr Opin Biotechnol. 16(1):63-72. Review.
  2. Gao X, Nie S. Quantum dot-encoded beads. Methods Mol Biol. (2005) 303:61-71.
  3. Goodchild RE, Kim CE, Dauer WT.Loss of the dystonia-associated protein torsinA selectively disrupts the neuronal nuclear envelope.(2005)Neuron. 48(6):923-32.
  4. Kang SM, Quan FS, Huang C, Guo L, Ye L, Yang C, Compans RW. Modified HIV envelope proteins with enhanced binding to neutralizing monoclonal antibodies.(2005) Virology. 331(1):20-32.
  5. Klapproth JM, Sasaki M, Sherman M, Babbin B, Donnenberg MS, Fernandes PJ, Scaletsky IC, Kalman D, Nusrat A, Williams IR.Citrobacter rodentium lifA/efa1 is essential for colonic colonization and crypt cell hyperplasia in vivo. (2005)Infect Immun. 73(3):1441-51.
  6. Ji-Yeon Shin, Zhi-Hui Fang, Zhao-Xue Yu, Chuan-En Wang, Shi-Hua Li, and Xiao Jian Li. (2005)Expression of mutant huntingtin in glial cells contributes to neuronal

2006

  1. Tang W, Zhang Y, Chang Q, Ahmad S, Dahlke I, Yi H, Chen P, Paul DL, Lin X.
    Connexin29 is highly expressed in cochlear Schwann cells, and it is required for the normal development and function of the auditory nerve of mice. (2006) J Neurosci.15;26(7):1991-9.
  2. .Xing Y, Smith AM, Agrawal A, Ruan G, Nie S.Molecular profiling of single cancer cells and clinical tissue specimens with semiconductor quantum dots.(2006)Int J Nanomedicine.;1(4):473-81.
  3. Rhyner MN, Smith AM, Gao X, Mao H, Yang L, Nie S. Quantum dots and multifunctional nanoparticles: new contrast agents for tumor imaging.(2006)Nanomed.1(2):209-17. Review.
  4. Dong J, Lu K, Lakdawala A, Mehta AK, Lynn DG. Controlling amyloid growth in multiple dimensions.(2006) Amyloid. 13(4):206-15. Review.
  5. Dong J, Shokes JE, Scott RA, Lynn DG.Modulating amyloid self-assembly and fibril morphology with Zn(II). (2006) J Am Chem Soc. 128(11):3540-2.
  6. Ye L, Lin J, Sun Y, Bennouna S, Lo M, Wu Q, Bu Z, Pulendran B, Compans RW, Yang C.Ebola virus-like particles produced in insect cells exhibit dendritic cell stimulating activity and induce neutralizing antibodies.(2006) Virology. 351(2):260-70
  7. .Anitha M, Gondha C, Sutliff R, Parsadanian A, Mwangi S, Sitaraman SV, Srinivasan S.GDNF rescues hyperglycemia-induced diabetic enteric neuropathy through activation of the PI3K/Akt pathway.(2006)J Clin Invest. 116(2):344-56.
  8. Pastorino L, Sun A, Lu PJ, Zhou XZ, Balastik M, Finn G, Wulf G, Lim J, Li SH, Li X, Xia W, Nicholson LK, Lu KP.The prolyl isomerase Pin1 regulates amyloid precursor protein processing and amyloid-beta production.Nature. (2006)23;440(7083):528-34.
  9. Lixia Zhao,1 Donghua Tian,1 Mingjing Xia,1 Wendy B. Macklin,2 and Yue Feng1 Rescuing qkv Dysmyelination by a Single Isoform of the Selective RNA-Binding Protein QKI The Journal of Neuroscience(2006) 26(44):11278 –11286
  10. Salazar, G. ; Craige, B., Styers, M. L., Newell-Litwa, K. A., Doucette, M. M.; Wainer, B. H.;Falcon-Perez, J. M.; Dell'Angelica, E. C., Peden, A. A, Werner, E.; Faundez, V. 2006. BLOC-1 ComplexDeficiency Alters the Targeting of Adaptor Protein Complex-3 Cargoes. Mol. Biol. Cell. 17:4014-4026.
  11. Calkins, C.C., Setzer, S.V., Jennings, JM., Summers, S., Tsunoda, K., Amagai, M., and Kowalczyk, A.P.2006. Desmosome Disassembly and desmoglein endocytosis are coordinated responses to pemphigus autoantibodies.J. Biol. Chem. 281:7623-763
  12. A. M. Smith, M. V. Rhyner, G. Ruan, H. Duan, and S. M. Nie. 2006.A Systematic
    Examination of Surface Coatings on the Optical and Chemical Properties of Semiconductor Quantum Dots. Phys. Chem. Chem. Phys. (PCCP), Royal Society of Chemistry (London).8:3895-3903.
  13. M. V. Yezhelyev, X. Gao , Y. Xing, A. Al-Hajj, S. M. Nie, and R. M. O’Regan.The Emerging Use of Nanoparticles in the Diagnosis and Treatment of Breast
    Cancer.Lancet Oncology.(2006) 7:657-667.
  14. R. Sinha, G. J. Kim, S. M. Nie, and D. M. Shin.2006. Nanotechnology in cancer therapeutics: bioconjugated nanoparticles for drug delivery.Mol. Cancer Therapeutics. 5, 1909, 1917.
  15. G. Ruan, A. Agrawal, X. Gao, and S. M. Nie. (2006) QDs as fluorescent labels for molecular and cellular imaging.Annu. Rev. Fluoresc.
  16. A. Mallappa, C. Gondha, R. Sutliff, A. Parsadanian, S. Mwangi, S.V. Sitaraman, and S Srinivasan.2006.GDNF rescues hyperglycemia-induced diabetic enteric neuropathy through activation of the PI3K/Akt pathway.The Journal of Clinical Investigation. 116(2): 344-356
  17. Dodson SE, Gearing M, Lippa CF, Montine TJ, Levey AI, Lah JJ. LR11/SorLA expression is reduced in sporadic Alzheimer disease but not in familial Alzheimer disease.J Neuropathol Exp Neurol. 2006 Sep;65(9):866-72

2007

  1. Sundstrom JB, Ellis JE, Hair GA, Kirshenbaum AS, Metcalfe DD, Yi H, Cardona AC, Lindsay MK, Ansari AA.Human tissue mast cells are an inducible reservoir of persistent HIV infection.(2007)Blood. 15;109(12):5293-300.
  2. Hu X, Shi Q, Zhou X, He W, Yi H, Yin X, Gearing M, Levey A, Yan R. Transgenic mice over expressing reticulon 3 develop neuritic abnormalities. (2007)EMBO J. 6;26(11):2755-67.
  3. Polavarapu R, Gongora MC, Yi H, Ranganthan S, Lawrence DA, Strickland D, Yepes M. Tissue-type plasminogen activator-mediated shedding of astrocytic low-density lipoprotein receptor-related protein increases the permeability of the neurovascular unit. (2007) Blood. 15;109(8):3270-8.
  4. Duan H, Nie S. Cell-penetrating quantum dots based on multivalent and endosome disrupting surface coatings.(2007) J Am Chem Soc. 21;129(11):3333-8
  5. Duan H, Nie S. Etching colloidal gold nanocrystals with hyperbranched and multivalent polymers: a new route to fluorescent and water-soluble atomic clusters. (2007) J Am Chem Soc.7;129(9):2412-3.
  6. Hammonds J, Chen X, Zhang X, Lee F, Spearman P. Advances in methods for the production, purification, and characterization of HIV-1 Gag-Env pseudovirion vaccines. (2007) Vaccine. 25(47):8036-48.
  7. Lu K, Guo L, Mehta AK, Childers WS, Dublin SN, Skanthakumar S, Conticello VP, Thiyagarajan P, Apkarian RP, Lynn DG.Macroscale assembly of peptide nanotubes. Chem Commun (Camb). 2007 Jul 14;(26):2729-31.
  8. Quan FS, Huang C, Compans RW, Kang SM.Virus-like particle vaccine induces protective immunity against homologous and heterologous strains of influenza virus. (2007) J Virol.81(7):3514-24.
  9. Laconte LE, Nitin N, Zurkiya O, Caruntu D, O'Connor CJ, Hu X, Bao G. Coating
    thickness of magnetic iron oxide nanoparticles affects R(2) relaxivity.(2007) J
    Magn Reson Imaging. 26(6):1634-41.
  10. Wirschell M, Zhao F, Yang C, Yang P, Diener D, Gaillard A, Rosenbaum JL, Sale WS.Building a radial spoke: Flagellar radial spoke protein 3 (RSP3) is a dimer.Cell Motil Cytoskeleton. 2007 Dec 21;
  11. Friedman MJ, Shah AG, Fang ZH, Ward EG, Warren ST, Li S, Li XJ. Polyglutamine domain modulates the TBP-TFIIB interaction: implications for its normal function and neurodegeneration.(2007) Nat Neurosci.10(12):1519-28.
  12. Theiss AL, Idell RD, Srinivasan S, Klapproth JM, Jones DP, Merlin D, Sitaraman SV.Prohibitin protects against oxidative stress in intestinal epithelial cells.(2007) FASEB J. 21(1):197-206.
  13. Costa T, Serrano M, Steil L, Völker U, Moran CP Jr, Henriques AO. The timing of cotE expression affects Bacillus subtilis spore coat morphology but not lysozyme resistance. (2007) J Bacteriol. 189(6):2401-10.
  14. Fischer LR, Glass JD.Axonal degeneration in motor neuron disease.(2007)Neurodegener Dis. 4(6):431-42 Review.
  15. Yepes M. Tweak and FN14 in central nervous system health and disease. Front Biosci. (2007) 1;12:2772-81.

2008

  1. Shrivastava-Ranjan P, Faundez V, Fang G, Rees H, Lah JJ, Levey AI and Kahn RA. Mint3/X11 Is an ADP-Ribosylation Factor-dependent Adaptor that Regulates the Traffic of the Alzheimer’s Precursor Protein from the Trans-Golgi Network (2008) Mol. Biol. Cell19: 51-64
  2. Qian X, Peng XH, Ansari DO, Yin-Goen Q, Chen GZ, Shin DM, Yang L, Young AN, Wang MD, Nie S. In vivo tumor targeting and spectroscopic detection with surface enhanced Raman nanoparticle tags.(2008)Nat Biotechnol. 26(1):83-90.

ACKNOWLEDGEMENTS AND AUTHORSHIP   |   EMORY UNIVERSITY   |   EMORY UNIVERSITY SCHOOL OF MEDICINE

2008 Emory University